rfPermute - Estimate Permutation p-Values for Random Forest Importance Metrics

Estimate significance of importance metrics for a Random Forest model by permuting the response variable. Produces null distribution of importance metrics for each predictor variable and p-value of observed. Provides summary and visualization functions for 'randomForest' results.

Last updated 1 years ago

6.81 score 27 stars 1 packages 92 scripts 1.7k downloads

swfscMisc - Miscellaneous Functions for Southwest Fisheries Science Center

Collection of conversion, analytical, geodesic, mapping, and plotting functions. Used to support packages and code written by researchers at the Southwest Fisheries Science Center of the National Oceanic and Atmospheric Administration.

Last updated 8 months ago

6.03 score 2 stars 21 packages 96 scripts 1.8k downloads

banter - BioAcoustic eveNT classifiER

Create a hierarchical acoustic event species classifier out of multiple call type detectors as described in Rankin et al (2017) <doi:10.1111/mms.12381>.

Last updated 11 months ago

acousticsbioacousticscetaceansclassificationdolphinsmachine-learningnoaarandom-forestspecies-identificationsupervised-learningsupervised-machine-learningwhales

4.22 score 9 stars 37 scripts 250 downloads

sprex - Species Richness and Extrapolation

Functions for calculating species richness for rarefaction and extrapolation, primarily non-parametric species richness such as jackknife, Chao1, and ACE. Also available are functions for plotting species richness and extrapolation curves, and computing standard diversity and entropy indices.

Last updated 1 years ago

2.70 score 1 stars 10 scripts 190 downloads